Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATGACTGTCAGTTGCAGT
(((((((((((((((((....&)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195415
GeneSymbolDCLK1
Binding site2105,2124
Score1.0
Seed1
Au0.618
Energy-20.8
Binding len19
Me-3.938
Phylopstem0.4410060555555556
Phylopflank0.22772927999999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure