Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAGCCCAGCTGTG
..(((((((.((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195415
GeneSymbolDCLK1
Binding site7179,7193
Score1.0
Seed1
Au0.544
Energy-19.0
Binding len14
Me-6.2
Phylopstem4.4795125
Phylopflank5.09215816875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure