Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAATAGCACAGCAGCTGGAGT
((.(((((((((((((..(((&)))..))))).).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195416
GeneSymbolDCLK1
Binding site1239,1263
Score0.923
Seed0
Au0.471
Energy-21.1
Binding len24
Me-5.495
Phylopstem0.6836909333333332
Phylopflank0.5217978999999998
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure