Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATGACTGTCAGTTGCAGT
(((((((((((((((((....&)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195416
GeneSymbolDCLK1
Binding site2031,2050
Score1.0
Seed1
Au0.618
Energy-20.8
Binding len19
Me-3.938
Phylopstem0.5409971666666666
Phylopflank0.3587737475
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure