Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACGGCCTCCTGGAGGCGCTGAGGAAGGAGCTAGCTGCAGT
((((((((((((((((..(((&)))..))))))......................)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195422
GeneSymbolGTPBP3
Binding site1296,1341
Score0.846
Seed1
Au0.309
Energy-21.2
Binding len45
Me-3.938
Phylopstem0.9642186153846154
Phylopflank1.6792109062500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure