Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGATGGAGGTTGCAGTGG
(((((.(((((((((((((...&)))))))))..))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001355019
GeneSymbolPPP2CA
Binding site3598,3623
Score0.846
Seed0
Au0.426
Energy-23.3
Binding len25
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure