Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCAGTTGAACCAAGTGATGAAATAAAGAGAGCCAGTGG
(((((((((((((((.(((...&.))).)).........)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330640
GeneSymbolDENND4C
Binding site5105,5146
Score1.0
Seed1
Au0.618
Energy-21.9
Binding len31
Me-4.171
Phylopstem1.61217752
Phylopflank1.5505888650000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure