Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCGGCCGCC
..((.(((((((((((.....&))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195470
GeneSymbolSATB1
Binding site460,475
Score0.846
Seed0
Au0.309
Energy-23.2
Binding len15
Me-9.076
Phylopstem1.9451873363636365
Phylopflank1.3456849525
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end3
Position5UTR
2D Structure