Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCATTCAGCGGAGACCTGCGGAGAGGCGGCGGCCGCGGCCTCCGCAAG
((((.(((((((((((.....&.)))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195479
GeneSymbolTFG
Binding site175,225
Score0.846
Seed0
Au0.397
Energy-22.3
Binding len21
Me-8.057
Phylopstem2.393839090909091
Phylopflank0.9359927362500001
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end3
Position5UTR
2D Structure