Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGGCTGCC
..((((((((((((((..(((&.)))..)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195483
GeneSymbolSLC12A8
Binding site1091,1139
Score0.923
Seed1
Au0.397
Energy-22.1
Binding len26
Me-4.957
Phylopstem0.3497089684210526
Phylopflank-0.07342893750000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure