Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCATGTGTATGCCT
....(((((((((((((.(...&).))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001355024
GeneSymbolCAPS2
Binding site2372,2389
Score0.846
Seed0
Au0.603
Energy-17.2
Binding len17
Me-9.547
Phylopstem-0.35258380714285714
Phylopflank1.6557460412499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure