Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCGTACTGCCGGGCTGCC
..((((((((((((((..(((&)))..))).)))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195520
GeneSymbolLRCOL1
Binding site129,152
Score0.846
Seed1
Au0.309
Energy-20.7
Binding len23
Me-4.957
Phylopstem-0.4842530301176469
Phylopflank-0.66445033015
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure