Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGGCAGCTGCC
..((((((((((((((.....&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195532
GeneSymbolSPTAN1
Binding site5620,5636
Score0.846
Seed1
Au0.368
Energy-22.9
Binding len16
Me-4.957
Phylopstem3.8351283733333332
Phylopflank5.9003484450000006
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure