Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCCCTGCAGCTGTT
..((((((((((..((((((.&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195553
GeneSymbolDCX
Binding site8465,8484
Score1.0
Seed1
Au0.544
Energy-24.8
Binding len19
Me-7.103
Phylopstem4.85478096
Phylopflank4.29085123
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure