Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCATCTGCAGCTGCT
..((((((((((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195553
GeneSymbolDCX
Binding site2873,2889
Score1.0
Seed1
Au0.529
Energy-24.3
Binding len16
Me-6.246
Phylopstem0.126435346
Phylopflank-0.38478005225
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure