Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGCCAGCGGTA
.....(((((((((((.((((&)))).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195555
GeneSymbolCLINT1
Binding site1360,1378
Score0.846
Seed0
Au0.471
Energy-20.6
Binding len18
Me-13.666
Phylopstem4.127638333333333
Phylopflank3.653681875
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure