Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAAGGGAAAGTAGCTGCT
..((((((((..((((.(((.&))).))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195571
GeneSymbolPRR9
Binding site389,412
Score0.923
Seed1
Au0.485
Energy-19.9
Binding len23
Me-11.129
Phylopstem1.0669519
Phylopflank0.66521051625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure