Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAAGCAGTCTGTT
..((((((((..((((.((((&)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195577
GeneSymbolTRPC5OS
Binding site82,100
Score0.923
Seed1
Au0.559
Energy-16.6
Binding len18
Me-11.129
Phylopstem0.49424366666666664
Phylopflank0.028428771249999985
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end7
Position5UTR
2D Structure