Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTATCCAGCACAGCTTTACCAAGCAGCTGCAC
.(((((((((....(((((((&.)))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195597
GeneSymbolSMLR1
Binding site2152,2187
Score1.0
Seed1
Au0.544
Energy-24.5
Binding len21
Me-12.111
Phylopstem-0.2769973888888889
Phylopflank-0.32498844375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure