Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTGTTTTCTTAAAATCAGCAGCTGTT
..((((((((((((.(((((.&.))))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195604
GeneSymbolSEPHS1
Binding site2226,2257
Score0.872
Seed1
Au0.647
Energy-20.0
Binding len21
Me-5.692
Phylopstem5.795967307692307
Phylopflank5.3852112287499985
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure