Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCGTAGCCAGCAAGTTCGGAGGTGTTAACCGCTGCTGTC
..(((((.(((((((......&.))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195643
GeneSymbolDHFR2
Binding site100,143
Score0.923
Seed0
Au0.485
Energy-18.9
Binding len15
Me-7.504
Phylopstem0.01861671428571429
Phylopflank0.16903588999999997
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end2
Position5UTR
2D Structure