Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTCCCTGGCTGGACTTGCGGAGTCCCCGCCGAAGAACCCGAGGAGCCAT
...(((((((((...((((...&.))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001355204
GeneSymbolTRAPPC2B
Binding site109,160
Score0.923
Seed0
Au0.456
Energy-21.8
Binding len15
Me-9.396
Phylopstem-0.10116283333333333
Phylopflank-0.01454320000000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure