Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCTGCACAAGCTCACCCACCCCTGTGCCAGGG
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195677
GeneSymbolVAPB
Binding site5579,5613
Score0.846
Seed1
Au0.382
Energy-16.4
Binding len11
Me-13.079
Phylopstem-0.4322512222222222
Phylopflank-0.9566918350000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure