Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTGCAGGTGGAGCTGCT
..((((((.((.(((((((((&))))..))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195677
GeneSymbolVAPB
Binding site6218,6240
Score0.846
Seed1
Au0.426
Energy-23.5
Binding len22
Me-9.36
Phylopstem-0.39982172727272736
Phylopflank-0.5945213637500002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure