Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACTGTGACTGGGGG
((.(((.(((((((((((((.&))))))))))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195677
GeneSymbolVAPB
Binding site4822,4843
Score0.846
Seed0
Au0.544
Energy-22.4
Binding len21
Me-7.039
Phylopstem-0.6968605615384615
Phylopflank-0.61521738125
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure