Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTCCGCACTGCAGGCCAGGG
.((((((...((.(((((((((&))))))..))).))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195683
GeneSymbolTGFBR3
Binding site587,611
Score0.846
Seed1
Au0.368
Energy-18.8
Binding len24
Me-9.695
Phylopstem0.7023124181818182
Phylopflank0.6830030574999999
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure