Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTCCTGCTAGGTGATGCCAGGA
.((((((((((...((((....&.))))...))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195728
GeneSymbolSLC1A2
Binding site5596,5621
Score1.0
Seed1
Au0.529
Energy-20.6
Binding len20
Me-9.286
Phylopstem0.0865682181818182
Phylopflank0.04447649125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure