Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGCTCCAGAAGCAGCAGCTGG
...((((((((((((((((((&))))))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195731
GeneSymbolCHPF
Binding site1188,1216
Score1.0
Seed0
Au0.353
Energy-25.5
Binding len28
Me-6.515
Phylopstem3.024436759259259
Phylopflank3.3488571549999997
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure