Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCAGGAAGCAGC
((((..((((((((((.....&))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195752
GeneSymbolTHAP3
Binding site199,217
Score1.0
Seed0
Au0.353
Energy-21.3
Binding len18
Me-9.958
Phylopstem2.3069045800000003
Phylopflank2.8625240562500007
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure