Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCAAAATCTAAAGACGCAGAAACAACTAATGTAGCTGCAGA
((((((((((((((((.....&.))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195794
GeneSymbolCLRN1
Binding site969,1016
Score1.0
Seed1
Au0.647
Energy-21.8
Binding len21
Me-3.938
Phylopstem0.40745671789473686
Phylopflank0.08203146525000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure