Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGCCTGCCAGA
..((((((..((((((......&))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001195799
GeneSymbolLDLR
Binding site2631,2646
Score0.846
Seed1
Au0.632
Energy-17.6
Binding len15
Me-7.256
Phylopstem-0.12922836666666668
Phylopflank0.3934756774999999
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure