Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAATGGCGGCTGCC
..((((((((.(((((.(((.&)))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195800
GeneSymbolLDLR
Binding site1594,1614
Score0.827
Seed1
Au0.368
Energy-26.3
Binding len20
Me-7.782
Phylopstem5.862235
Phylopflank2.6658965050000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure