Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACGGCGGCTGTT
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195800
GeneSymbolLDLR
Binding site543,558
Score0.981
Seed1
Au0.426
Energy-21.9
Binding len15
Me-7.782
Phylopstem5.41672
Phylopflank3.520323047499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure