Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGTGCTGTTCCAGAATTCAAAGAAGAGAAACTGCAGCTGCAAC
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195822
GeneSymbolHSDL2
Binding site698,744
Score1.0
Seed1
Au0.544
Energy-24.7
Binding len16
Me-4.906
Phylopstem4.984490142857142
Phylopflank4.419047272499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure