Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGAGCCGCATCCACGAGCGCCTTGCGCACCTCCACGCTGCC
..(((((((((((((((((((&))))))))..))))))..........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195833
GeneSymbolRINL
Binding site1295,1343
Score0.846
Seed1
Au0.25
Energy-24.4
Binding len48
Me-4.957
Phylopstem0.7228696468085106
Phylopflank0.644479395
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end8
PositionCDS
2D Structure