Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGCACCGGAGCTGCGGC
((((((((.(((.(((..((.&))..)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001195833
GeneSymbolRINL
Binding site1186,1206
Score0.846
Seed1
Au0.25
Energy-24.2
Binding len20
Me-6.283
Phylopstem0.262801
Phylopflank0.006817789999999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure