Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGTAATCCGCAGTTGCT
..((((((((((((((((((.&.)))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197026
GeneSymbolPLEKHA8
Binding site6402,6423
Score0.923
Seed1
Au0.618
Energy-23.6
Binding len21
Me-4.957
Phylopstem1.2646667421052633
Phylopflank0.21907882374999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure