Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACATTTTTTGTGGAGACAAGGTCTATGTTGGCCAGGC
.((((((...((((((((((((&.)))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001197079
GeneSymbolIFRD1
Binding site272,312
Score1.0
Seed1
Au0.471
Energy-21.6
Binding len20
Me-8.406
Phylopstem-0.32818166666666665
Phylopflank-0.03441950999999998
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure