Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACACTGTGGTTGTCAAG
((((((((((((.(((((((.&)))))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197080
GeneSymbolIFRD1
Binding site1816,1837
Score0.833
Seed1
Au0.735
Energy-20.4
Binding len21
Me-5.227
Phylopstem0.5306347230769229
Phylopflank0.47165646262499983
Longest consecutive pairings16
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure