Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGAGGCGCTGGGCACAGGTTGCCAGGACAACCGTGAGGCTGCAT
.(((((((((((((((..(((&.)))...))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197097
GeneSymbolPRSS3
Binding site28,76
Score1.0
Seed1
Au0.471
Energy-25.9
Binding len25
Me-3.793
Phylopstem0.1642618470588235
Phylopflank-0.3516775714999999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure