Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAACCTCAGCTGTAT
.((((((((.(((((...(((&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355236
GeneSymbolC3orf49
Binding site176,194
Score1.0
Seed1
Au0.515
Energy-22.1
Binding len18
Me-5.269
Phylopstem-0.008114538250000069
Phylopflank0.13572306857500005
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure