Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCTTCTGTGGTTGTAAA
((((((((((((..(((((((&)))))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197109
GeneSymbolSCHIP1
Binding site996,1018
Score0.885
Seed1
Au0.618
Energy-20.6
Binding len22
Me-6.084
Phylopstem5.955610916666667
Phylopflank5.403421626250001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure