Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGAGAACCCACTGAAGCGGCTGTTGGTGCCGGGG
.((((((((.((((((......&.)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001197124
GeneSymbolIRF3
Binding site796,832
Score0.846
Seed1
Au0.426
Energy-17.3
Binding len17
Me-5.036
Phylopstem2.81550825
Phylopflank1.5979325212500002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure