Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAAGAGGAATTTCCGCTCTGCCCTCAACCGCAAAGAAGGGTTGCGT
.((((((((((((((...(((&.)))..)))))))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197124
GeneSymbolIRF3
Binding site457,508
Score0.846
Seed1
Au0.441
Energy-20.5
Binding len28
Me-4.026
Phylopstem-0.03215581904761906
Phylopflank-0.3318479762500001
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure