Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCAACCGCAAAGAAGGGTTGCGT
.((((((((((((((...(((&)))..)))))))).......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197127
GeneSymbolIRF3
Binding site308,335
Score0.827
Seed1
Au0.441
Energy-20.3
Binding len27
Me-4.026
Phylopstem2.0377635
Phylopflank1.5470528862499995
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end5
Position5UTR
2D Structure