Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAGCTGGAGCG
.....(((.((((((((((..&)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197181
GeneSymbolTUBB3
Binding site386,401
Score0.846
Seed0
Au0.397
Energy-20.7
Binding len15
Me-14.722
Phylopstem5.3168991
Phylopflank4.7185940125
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure