Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAACGGCAGCCGCGGCAGCAGC
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197293
GeneSymbolDPYSL2
Binding site184,208
Score0.846
Seed0
Au0.294
Energy-25.4
Binding len18
Me-8.057
Phylopstem0.4184876894545454
Phylopflank0.7900351266750001
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure