Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCAAGCGGGTGCTCTCTGTCCTACAGGACCATCAGCTGCAT
.((((((((.((((.(.(((.&.)))..).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001197296
GeneSymbolECM2
Binding site962,1008
Score0.846
Seed1
Au0.426
Energy-21.1
Binding len23
Me-5.771
Phylopstem-0.6904596875
Phylopflank-0.07860757724999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure