Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCAGTGTGAAGGCAGGTT
(((((.(.((((.(((((((..&))))))).))))..).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001197297
GeneSymbolGABPA
Binding site1705,1727
Score0.846
Seed0
Au0.574
Energy-19.0
Binding len22
Me-9.441
Phylopstem1.2328055
Phylopflank2.0061878837500005
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure