Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCACTTGTATGCCT
....(((((((((.((.(((((&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198532
GeneSymbolOXR1
Binding site1898,1915
Score0.846
Seed0
Au0.588
Energy-17.2
Binding len17
Me-10.403
Phylopstem3.845053555555556
Phylopflank5.61923937775
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure